Dr.Tanvir Alam’s work has been centered on biomedical discoveries using artificial intelligence and machine learning techniques in big data platform. His current research focusing on long non-coding RNAs, short RNAs, and their transcription regulation to understand how these genes are involved in different diseases and their function in cellular process using next-generation sequencing data.
He is also interested in protein-protein interactions, which are involved in cell adhesion and cancer metastasis. He is also developing knowledge-based methods to understand the genotype-phenotype relationship.
Hamad Bin Khalifa University; Qatar
2018 - PresentSaudi Telecom Company; Saudi Arabia
2016-2018RIKEN; Japan
2015-2015AfriGIS ; South Africa
2008-2009Department of Computer Science; State University of Bangladesh; Bangladesh
2007-2008King Abdullah University of Science and Technology; Saudi Arabia
2016King Abdullah University of Science and Technology; Saudi Arabia
2012Bangladesh University of Engineering & Technology; Bangladesh
2007Alam T, Lipovich L. Non-coding RNA, 2021. https://doi.org/10.3390/ncrna7010018
2021Al-Absi HRH, Refaee MA, Rehman AU, Islam MT, Belhaouari SB, Alam T. IEEE Access, 2021. https://doi.org/10.1109/ACCESS.2021.3059469
2021Islam MT, Al-Absi HRH, Ruagh E, Alam T. IEEE Access, 2021. https://doi.org/10.1109/ACCESS.2021.3052477
2021Alam T, Agrawal S, Severin J, Young RS, Andersson R, Arner E, Hasegawa A, Lizio M, Ramilowski J, Abugessaisa I, Ishizu Y, Noma S, Tarui H, Taylor MS, Lassmann T, Itoh M, Kasukawa T, Kawaji H, Marchionni L, Sheng G, Forrest AR, Khachigian LM, Hayashizaki LM, Carninci P, de Hoon M. Genome Research, 2020. http://www.genome.org/cgi/doi/10.1101/gr.255679.119
2020Khan JY, Khan JY, Khondaker MTI, Hoque IT, Al-Absi HRH, Guler R, Alam T, Rahman MS. JMIR Medical Informatics, 2020. https://doi.org/10.2196/21648
2020Al-Mulla J, Alam T. IEEE Access, 2020. https://doi.org/10.1109/ACCESS.2020.3038601
2020Alam T, Al-Absi HRH, Scheimer S. Non-Coding RNA, 2020. https://doi.org/10.3390/ncrna6040047
2020Khondaker MTI, Khan JY, Alam T, Rahman MS. IEEE Access, 2020. https://doi.org/10.1109/ACCESS.2020.3021658
2020Alam T, Alazmi M, Naser R, Huser F, Momin AA, Astro V, Hong S, Walkiewicz KW, Canlas CG, Huser RI, Ali AJ, Merzaban J, Adamo A, Jaremko M, Jaremko L, Bajic VB, Gao X, Arold ST. Bioinformatics, 2019. https://doi.org/10.1093/bioinformatics/btz703
2019Scientific Reports volume 8, Article number: 6758 (2018), doi:10.1038/s41598-018-24509-6
Roy S, Schmeier S, Kaczkowski B, Arner E, Alam T, Ozturk M, Tamgue O, Parihar SP, Kawaji H, Itoh M, Lassmann T, Carninci P, Hayashizaki Y, Forrest ARR, Guler R, Bajic VB, Brombacher F, Suzuki H .
2018Nature Biotechnology 2017, doi:10.1038/nbt.3947
Rie DD, Abugessaisa I, Alam T, Arner E, Arner P, Ashoor H, Åström G, Babina M, Bertin N, Burroughs AM,Daub CO, Detmar M, Deviatiiarov R, Fort A, Goldowitz D, Guhl S, Harshbarger J, Hasegawa A, Hashimoto K, Heutink P, Huang E, Klinken P, Lassmann T, Lecellier C, Lee W, Lizio M, Makeev V, Mathelier A, Medvedeva YA, Mungall C, Noma S, Ohshima M, Persson H, Roudnicky F, Sætrom P, Severin J, Summers KM, Tarui H, Vitting-Seerup K, Wells C, Winteringham L, Yamaguchi Y, Kawaji H, Sandelin A, Rehli M, the FANTOM consortium, Hayashizaki Y, Carninci P, Forrest ARR, HoonMJLde.
2017RNA Biology, 2017, doi:10.1080/15476286.2017.1312243
Salhi A, Essack M, Alam T, Bajic VP, Ma L, Radovanovic A, Marchand B, Schmeier S, Zhang Z, Bajic VB.
2017Nature 2016, doi:10.1038/nature21374
Hon CC, Ramilowski JA, Harshbarger J, Bertin N, Rackham OJL, Gough J, Denisenko E, Schmeier S, Poulsen TM, Severin J, Lizio M, Kawaji H, Kasukawa T, Itoh M, Burroughs AM, Noma S, Djebal Si, Alam T, Medvedeva YA, Testa AC, Lipovich L, Yip CW, Abugessaisa I,Mendez M, Hasegawa A, Tang D, Lassmann T, Heutink P, Babina M, Wells CA, Kojima S, Nakamura Y, Suzuki H, Daub CO, HoonMJLde, Arner E, the FANTOM consortium, Hayashizaki Y, Carninci P,Forrest ARR.
2016Nucleic Acids Research 2016, doi:10.1093/nar/gkw973
Alam T, Uludag M, Essack M, Salhi A, Ashoor H, Hanks JB, Kapfer C, Mineta K, Gojobori T, Bajic VB.
2016Nucleic Acids Research 2016, doi:10.1093/nar/gkw1007
Schmeier S, Alam T, Essack M, Bajic VB.
2016Scientific Reports 2015 Jun 15;5:11136. doi: 10.1038/srep11136
Khamis, AM, Hamilton AR, Medvedeva YA, Alam T, Alam I, Essack M, Umylny B, Jankovic BR, Naeger NL, Suzuki M, Harbers M, Robinson GE, Bajic VB.
2015Nucleic Acids Research 2015 Aug 18;43(14):6969-82. doi: 10.1093/nar/gkv646
Roy S, Schmeier S, Arner E, Alam T, Parihar SP, Ozturk M, Tamgue O, Kawaji H, de Hoon MJ, Itoh M, Lassmann T, Carninci P, Hayashizaki Y, Forrest AR, Bajic VB, Guler R, Consortium FANTOM, Brombacher F, Suzuki H.
2015PLoS One 2014 Oct 2;9(10):e109443. doi: 10.1371/journal.pone.0109443. eCollection 2014
Alam T, Medvedeva YA, Jia H, Brown JB, Lipovich L, Bajic VB.
2014Biochemical Journal 2014 Jun 15;460(3):317-29. doi: 10.1042/BJ20140298
Alam T, Alazmi M, Gao X, Arold ST.
2014